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Home » Pizza Recipes » Spaghetti Squash Boats

Spaghetti Squash Boats

A photo of Vered DeLeeuw.
by Vered DeLeeuwUpdated Dec 21, 2024
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5 from 2 votes

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Spaghetti squash boats are so much fun to make and eat! And despite being a multi-step recipe, they're ready in less than an hour. These delicious "boats" combine the wonderful flavors and cheesiness of pizza with a tasty vegetable base.

Spaghetti squash boats are served on a white plate.

When my kids ask if we can order pizza and I have spaghetti squash in the house, I ask them if they would like these boats instead. Nine times out of ten, the enthusiastic answer is "Yes!" So this should tell you how good they are. It's genius, really - enjoy all the cheesiness and goodness of pizza but with a vegetable base.

Ingredients

The ingredients needed to make spaghetti squash boats.

The full list of ingredients and exact measurements are listed in the recipe card below. Here are my comments on some of the ingredients.

  • Spaghetti squash: I use a small, 2-pound squash in this recipe.
  • Marinara sauce: Try to use a sugar-free sauce such as Rao's.
  • Shredded mozzarella: Provolone is another good option.
  • Topping: I like to use pepperoni.
  • Grated parmesan: It's best to use finely grated parmesan and not coarsely shredded, although if all you have is shredded, you can use that.

Variations

  • You can use different melty cheeses instead of mozzarella. Provolone is a good option.
  • You can use whatever toppings you like and enjoy. I like to use pepperoni, but other options include olives, sauteed mushrooms, red onions, and bell peppers.
  • Mix a cup of shredded baked chicken breast into the squash.

Instructions

The recipe card below lists the detailed instructions for making this recipe. Here's an overview of the steps:

Your first step is to microwave the squash. Or you can bake the spaghetti squash in the oven. Rake a fork back and forth to remove strands of the flesh, keeping the shells intact.

Spaghetti squash strands in a glass bowl.

Mix the strands with marinara sauce and shredded mozzarella, then transfer them back to the shells. Arrange the pepperoni on top and sprinkle the boats with the remaining mozzarella and parmesan.

The boats are ready for the oven.

Bake the boats until the cheese is melted and lightly browned, about 15 minutes. Let rest for five minutes before serving.

The boats are ready in the pan.

Expert Tip

When you rake the squash's flesh to create the strands, work carefully so that the shells remain intact, and leave some flesh in the shells.

But if the shells get torn despite all your best efforts, do not despair. Simply bake the filling in a casserole dish like a square 8-inch baking dish. It won't be as pretty, but it will be just as delicious!

Recipe FAQs

Is it better to microwave or bake the squash?

I like to microwave it because it's so much faster, but baking does yield superior results in terms of texture and flavor.

Can I eat the squash's skin?

Theoretically, you could, but I don't think it would be a very pleasant experience. Once baked in the oven, the skin will be tough and dry.

Why do you pierce the squash before microwaving it?

Piercing it helps prevent it from exploding in the microwave.

Serving Suggestions

I usually serve spaghetti squash boats as a main course, alongside a simple green vegetable that I can cook in the same 425°F oven, like roasted Brussels sprouts, roasted green beans, or roasted broccolini.

You can also serve them with an easy side salad like arugula salad, cucumber vinegar salad, or cherry tomato salad.

When I serve these boats as a side dish, I pair them with a main course that I can cook in the same oven, like chicken leg quarters, baked salmon, and roasted rack of lamb.

Storing Leftovers

You can keep the leftovers in a sealed container in the fridge for 3-4 days. They keep well! Reheat them covered in the microwave at 50% power. You can also reheat them uncovered in a 350°F oven. I don't recommend freezing the leftovers.

Spaghetti squash boats are served on a white plate.

More Spaghetti Squash Recipes

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Recipe Card

Spaghetti squash boats are served on a white plate.
5 from 2 votes
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Spaghetti Squash Boats Recipe

Spaghetti squash boats are so much fun to make and eat! And despite being a multi-step recipe, they're ready in less than an hour.
Prep Time30 minutes mins
Cook Time15 minutes mins
Rest time5 minutes mins
Total Time50 minutes mins
Course: Side Dish
Cuisine: American
Servings: 2 servings
Calories: 270kcal
Author: Vered DeLeeuw
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Ingredients

  • 2 pounds spaghetti squash
  • ½ cup marinara sauce
  • 4 ounces part-skim mozzarella - shredded, divided
  • Dash sea salt
  • Dash black pepper
  • 1 ounce pepperoni
  • 2 tablespoons parmesan - grated
  • 2 tablespoons parsley - chopped

Instructions

  • Preheat your oven to 425°F.
    An oven set to 425°F.
  • Cook the spaghetti squash in the microwave: wipe the skin clean, pierce it in a few places with a sharp knife, place it on a microwave-safe plate, and microwave on high until tender, for about 5 minutes on each side.
    Microwaving the squash.
  • Allow the cooked squash to rest for 10 minutes until cool enough to handle. Cut it open with a sharp knife. Use a large spoon to discard the pulp and seeds. Rake a fork back and forth to create spaghetti-like strands, placing the strands in a large mixing bowl. Work carefully so that the shells remain intact, and leave some flesh in the shells.
    Spaghetti squash strands in a glass bowl.
  • Add the marinara sauce to the spaghetti squash strands. Mix well to coat. Mix in 2 ounces of the shredded mozzarella.
    Adding marinara sauce to the squash.
  • Sprinkle the inside of the squash shells with salt and pepper. Transfer the marinara-coated strands back into the shells. Arrange the pepperoni on top and sprinkle the boats with the remaining mozzarella and with parmesan.
    The boats are ready for the oven.
  • Place the squash shells in a square 8-inch baking dish, or any other baking dish that will hold them snugly. Bake until the cheese is melted and lightly browned, about 15 minutes.
    The boats are ready in the pan.
  • Remove the pan from the oven. Sprinkle the boats with parsley. Allow them to cool for about 5 minutes, then serve.
    Spaghetti squash boats are served.

Notes

  • When you rake the squash's flesh to create strands, work carefully so that the shells remain intact, and leave some flesh in the shells. But if, despite your best efforts, the shells get torn, do not despair. Simply bake the filling in a casserole dish, such as a square 8-inch baking dish. It won't be as pretty, but it will be just as delicious!
  • You can use whatever toppings you like and enjoy. I like to use pepperoni, but other options include olives, sauteed mushrooms, red onions, and bell peppers.
  • You can mix a cup of shredded baked chicken breast into the squash.
  • You can keep the leftovers in the fridge, in a sealed container, for 3-4 days. They keep well! Reheat them gently, covered, in the microwave at 50% power. You can also reheat them uncovered in a 350°F oven. I don't recommend freezing the leftovers.

Nutrition per Serving

Serving: 0.5 recipe | Calories: 270 kcal | Carbohydrates: 14 g | Protein: 20 g | Fat: 15 g | Saturated Fat: 7 g | Sodium: 816 mg | Fiber: 3 g | Sugar: 6 g

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Most recipes are low-carb and gluten-free, but some are not. Recommended and linked products are not guaranteed to be gluten-free. Nutrition info is approximate. Please verify it independently. The carb count excludes non-nutritive sweeteners. Please read these Terms of Use before using any of my recipes.

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A photo of Vered DeLeeuw.

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Healthy Recipes Blog was founded in 2011 by Vered DeLeeuw. It features real food recipes with a focus on low-carb and gluten-free ingredients. All recipes are nutritionally reviewed by a Registered Dietitian. Contact us at HealthyRecipesBlog@gmail.com.

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