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Home » Breakfast Recipes » Breakfast Egg Muffins

Breakfast Egg Muffins

A photo of Vered DeLeeuw.
by Vered DeLeeuwUpdated Apr 25, 2025
8 Comments
5 from 13 votes

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These egg muffins are perfect for breakfast! They are tasty and portable, and you can change them with different cheeses and veggies.

Egg muffins are served on a white plate.

These egg muffins make a quick and easy breakfast or snack. They keep well in the fridge, so you can make a big batch and enjoy it for several days. I make a batch every few days, refrigerate it, and briefly reheat the muffins in the microwave. Although I enjoy baked goods like keto blueberry muffins or keto French toast, I have always felt that a savory egg-based breakfast is more satiating.

Ingredients

The ingredients needed to make egg muffins.

Here's an overview of the ingredients needed to make this recipe. The exact measurements are listed in the recipe card below.

  • Oil: For greasing the muffin cups.
  • Eggs: I use large eggs in most of my recipes, including this one.
  • To season: Black pepper, garlic powder, and red pepper flakes.
  • Grated Parmesan: It's best to use finely grated Parmesan rather than coarsely shredded.
  • Chopped scallions: I use only the green part.
  • Cherry tomatoes: Select small, firm tomatoes and slice them in half.

Variations

  1. You can experiment with different seasonings and cheeses. I've made these muffins with shredded sharp cheddar and seeded sliced jalapenos. I've also made them with crumbled feta, dried oregano, and black olives or sun-dried tomatoes. Both versions were delicious.
  2. Another tasty addition is ¼ cup of cooked and crumbled bacon.
  3. Make them in different shapes! In the photo below, I made them in heart-shaped molds for a Valentine's Day breakfast. 🙂
Silicone molds to make heart-shaped egg muffins.

Instructions

Just like salami egg cups, a big advantage of this breakfast recipe is that it's so easy to make. The detailed instructions for making this recipe are included in the recipe card below. Here are the basic steps:

You start by mixing the eggs and spices in a measuring cup. The spout will make the mixture easier to pour into the muffin cups. Use a rubber spatula to mix in the cheese and scallions.

Adding parmesan and scallions to the egg mixture.

Pour the mixture into six greased silicone muffin cups. Divide the tomatoes evenly among the cups, placing them on top of the muffins.

Pouring the egg mixture into the pan.

Bake the muffins until they are set and puffed, about 20-25 minutes at 375°F.

The egg muffins emerge puffy from the oven.

5 stars rating. These muffins are delicious! My husband is diabetic and I use your recipes regularly. I also try adding different low carb ingredients to the muffins. I use a silicon muffin pan and they turn out great. Thanks for all your delicious low carb recipes!
Glenna
Read more comments

Recipe Tips

  • It's best to bake these muffins in a lightly greased silicone muffin pan. That's the only type of pan they reliably won't stick to. Another safe option is to use small ceramic ramekins and grease them well.
  • I don't add salt because the parmesan adds plenty. However, you can add a small amount of salt if you prefer (the nutritional information will obviously change).
  • As shown in the short video clip below, the muffins emerge from the oven puffed and then slowly deflate. That's normal and expected.

Recipe FAQs

How do you prevent egg muffins from deflating?

They do deflate, much like a soufflé. Adding cheese helps to stabilize them and minimize deflating. But they will always deflate to some extent. That's expected and normal.

Will the muffins stick to cupcake liners?

They might. That's why I recommend using well-greased silicone molds when making them. If you opt for paper liners, grease them well.

Should I add flour?

No. There's no need to add flour to the mixture. The muffins are perfect without it!

Can I double the recipe?

Absolutely. This recipe scales easily - you can double it to make 12 muffins.

Can I keep the leftovers?

Yes. You can keep them in an airtight container in the fridge for up to 4 days. Reheat them gently in the microwave at 50% power or enjoy them cold. You can also freeze the cooled muffins in a single layer in freezer bags for up to three months.

Serving Suggestions

When I eat them as a snack, I simply grab one or two muffins and eat them, often straight out of the fridge.

When I serve them for breakfast, I like to add a small bowl of fresh berries. They also pair well with oven bacon, and it's convenient that both can be baked in a 375°F oven.

My husband, who enjoys spicy food, likes to drizzle them with hot sauce. And our youngest, The Picky Eater, tops hers with ketchup. We sigh and avert our eyes. 🙂

Egg muffins are served on a white plate.

Recipe Card

Egg muffins are served on a white plate.
5 from 13 votes
Save this RecipeSaved! Rate this Recipe Print Recipe

Quick Breakfast Egg Muffins

These egg muffins are perfect for breakfast. Change them up with different cheeses, vegetables, and seasonings.
Prep Time15 minutes mins
Cook Time20 minutes mins
Total Time35 minutes mins
Course: Breakfast
Cuisine: American
Servings: 6 muffins
Calories: 94kcal
Author: Vered DeLeeuw
Prevent your screen from going dark

Video

Ingredients

  • Avocado oil spray
  • 6 large eggs
  • ¼ teaspoon black pepper
  • ¼ teaspoon garlic powder
  • ¼ teaspoon red pepper flakes
  • 6 tablespoons parmesan - grated
  • ¼ cup scallions - chopped, green part
  • ¼ cup cherry tomatoes - halved

Instructions

  • Preheat the oven to 375°F. Line six muffin pan cavities with silicone cups and spray them with oil.
    A muffin pan with silicone molds.
  • In a large spouted measuring cup, whisk together the eggs, black pepper, garlic powder, and red pepper flakes. Using a rubber spatula, mix in the parmesan and scallions.
    Mixing eggs and spices.
  • Fill the prepared muffin cups almost to the edge. The egg mixture is liquid, so I like to use a measuring cup with a spout when pouring.
    Pouring the egg mixture into the pan.
  • Top the muffins with the sliced tomatoes, dividing them evenly.
    Adding tomatoes to the egg muffins.
  • Place the muffin pan on a large baking sheet to catch any spills. Bake until the muffins are set, puffed, and lightly browned, and a toothpick inserted in their center comes out clean, about 20-25 minutes.
    Placing the egg muffins in the oven.
  • Allow the muffins to cool in the pan for a couple of minutes until they are easier to handle, then release them from the silicone cups. Enjoy them immediately, or place them on a cooling rack for 10-15 more minutes before refrigerating them in an airtight container.
    The egg muffins emerge puffy from the oven.

Notes

  • It's best to bake these muffins in a lightly greased silicone muffin pan. That's the only type of pan they reliably won't stick to. Another safe option is to use small ceramic ramekins and grease them well.
  • I don't add salt because the parmesan adds plenty. However, you can add a small amount of salt if you prefer (the nutritional information will obviously change).
  • The muffins puff up in the oven, then deflate when you take them out. This is normal and expected.
  • You can experiment with different seasonings and cheeses. I've made these muffins with shredded sharp cheddar and seeded sliced jalapenos. I've also made them with crumbled feta, dried oregano, and black olives or sun-dried tomatoes. Both versions were delicious. Another tasty addition is cooked and crumbled bacon.
  • This recipe scales easily. You can double it to make 12 muffins. Keep them in an airtight container in the fridge for up to 4 days. Reheat them gently in the microwave at 50% power or enjoy them cold.

Nutrition per Serving

Serving: 1 muffin | Calories: 94 kcal | Carbohydrates: 2 g | Protein: 7 g | Fat: 6 g | Saturated Fat: 2 g | Sodium: 153 mg

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Disclaimers

Most recipes are low-carb and gluten-free, but some are not. Recommended and linked products are not guaranteed to be gluten-free. Nutrition info is approximate. Please verify it independently. The carb count excludes non-nutritive sweeteners. Please read these Terms of Use before using any of my recipes.

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Comments

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    Recipe Rating




  1. Leslie M. says

    January 17, 2025 at 6:34 pm

    5 stars
    Just made these and they are delicious! Will definitely make again! Thank you for sharing!

    Reply
    • Vered DeLeeuw says

      January 17, 2025 at 6:48 pm

      You're very welcome, Leslie! I'm so glad you enjoyed these muffins.

  2. Glenna says

    January 07, 2025 at 3:52 pm

    5 stars
    These muffins are delicious!!..My husband is diabetic and I use your recipes regularly….I also try adding different low carb ingredients to the muffins ..I use a silicon muffin pan and they turn out great!! Thanks for all your delicious low carb recipes!!

    Reply
    • Vered DeLeeuw says

      January 07, 2025 at 4:27 pm

      Hi Glenna,
      I'm glad to hear you're still making these muffins and that my website is useful to you! Thank you for your comments.

  3. Katie says

    December 29, 2024 at 1:37 pm

    5 stars
    I make these every week. They are perfect for a quick low-carb breakfast. I like the feta and oregano version best!

    Reply
    • Vered DeLeeuw says

      December 30, 2024 at 10:12 am

      Yay! Glad you like them, Katie!

  4. Glenna says

    December 03, 2024 at 4:24 pm

    5 stars
    I made these Egg Muffins yesterday …delicious!!..I put some sweet pepper pieces and some onion in the muffins…I purchased a silicone muffin pan and the egg muffins turn out great!! I just spray olive oil spray into each muffin cup and pour in the egg mixture ..they come out perfect!!..This is an easy fun breakfast!!

    Reply
    • Vered DeLeeuw says

      December 03, 2024 at 4:25 pm

      I'm so glad you enjoyed this recipe, Glenna! Thank you for sharing your experience.

A photo of Vered DeLeeuw.

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Healthy Recipes Blog was founded in 2011 by Vered DeLeeuw. It features real food recipes with a focus on low-carb and gluten-free ingredients. All recipes are nutritionally reviewed by a Registered Dietitian. Contact us at HealthyRecipesBlog@gmail.com.

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